Browsing by Author "Kolaczyk, Eric D"

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Integration of Relational and Hierarchical Network Information for Protein Function Prediction

Jiang, Xiaoyu; Nariai, Naoki; Steffen, Martin; Kasif, Simon; Kolaczyk, Eric D (BioMed Central, 2008-8-22)

BACKGROUND. In the current climate of high-throughput computational biology, the inference of a protein's function from related measurements, such as protein-protein interaction relations, has become a canonical task. Most ...
On the Choice and Number of Microarrays for Transcriptional Regulatory Network Inference

Cosgrove, Elissa J; Gardner, Timothy S; Kolaczyk, Eric D (BioMed Central, 2010-9-9)

BACKGROUND. Transcriptional regulatory network inference (TRNI) from large compendia of DNA microarrays has become a fundamental approach for discovering transcription factor (TF)-gene interactions at the genome-wide level. ...

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