Browsing CAS: Computer Science: Scholarly Papers by Title

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Browsing CAS: Computer Science: Scholarly Papers by Title

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  • Evolutionary History of Mammalian Transposons Determined by Genome-Wide Defragmentation
    Giordano, Joti; Ge, Yongchao; Gelfand, Yevgeniy; Abrusán, György; Benson, Gary; Warburton, Peter E (Public Library of Science, 2007-7-13)
    The constant bombardment of mammalian genomes by transposable elements (TEs) has resulted in TEs comprising at least 45% of the human genome. Because of their great age and abundance, TEs are important in comparative ...
  • Finding Local Communities in Protein Networks
    Voevodski, Konstantin; Teng, Shang-Hua; Xia, Yu (BioMed Central, 2009-9-18)
    BACKGROUND. Protein-protein interactions (PPIs) play fundamental roles in nearly all biological processes, and provide major insights into the inner workings of cells. A vast amount of PPI data for various organisms is ...
  • Spectral affinity in protein networks
    Voevodski, Konstantin; Teng, Shang-Hua; Xia, Yu (BioMed Central, 2009-11-29)
    BACKGROUND. Protein-protein interaction (PPI) networks enable us to better understand the functional organization of the proteome. We can learn a lot about a particular protein by querying its neighborhood in a PPI network ...
  • TRDB—The Tandem Repeats Database
    Gelfand, Yevgeniy; Rodriguez, Alfredo; Benson, Gary (Oxford University Press, 2006-12-14)
    Tandem repeats in DNA have been under intensive study for many years, first, as a consequence of their usefulness as genomic markers and DNA fingerprints and more recently as their role in human disease and regulatory ...

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