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dc.contributor.authorRobasky, Kimberlyen_US
dc.contributor.authorBulyk, Martha L.en_US
dc.date.accessioned2012-01-11T21:11:31Z
dc.date.available2012-01-11T21:11:31Z
dc.date.copyright2010en_US
dc.date.issued2010-10-30en_US
dc.identifier.citationRobasky, Kimberly, Martha L. Bulyk. "UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein–DNA interactions" Nucleic Acids Research 39(Database issue): D124-D128. (2010)en_US
dc.identifier.issn1362-4962en_US
dc.identifier.urihttps://hdl.handle.net/2144/3210
dc.description.abstractThe Universal PBM Resource for Oligonucleotide-Binding Evaluation (UniPROBE) database is a centralized repository of information on the DNA-binding preferences of proteins as determined by universal protein-binding microarray (PBM) technology. Each entry for a protein (or protein complex) in UniPROBE provides the quantitative preferences for all possible nucleotide sequence variants ('words') of length k ('k-mers'), as well as position weight matrix (PWM) and graphical sequence logo representations of the k-mer data. In this update, we describe <130% expansion of the database content, incorporation of a protein BLAST (blastp) tool for finding protein sequence matches in UniPROBE, the introduction of UniPROBE accession numbers and additional database enhancements. The UniPROBE database is available at http://uniprobe.org.en_US
dc.description.sponsorshipNational Institutes of Health (R01 HG003985)en_US
dc.language.isoenen_US
dc.publisherOxford University Pressen_US
dc.rightsCopyright Robasky, Kimberly, Martha L. Bulyk 2010. Published by Oxford University Press.en_US
dc.rights.urihttp://creativecommons.org/licenses/by-nc/2.5en_US
dc.titleUniPROBE, Update 2011: Expanded Content and Search Tools in the Online Database of Protein-Binding Microarray Data on Protein–DNA Interactionsen_US
dc.typeArticleen_US
dc.identifier.doi10.1093/nar/gkq992en_US
dc.identifier.pmid21037262en_US
dc.identifier.pmcid3013812en_US


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Copyright Robasky, Kimberly, Martha L. Bulyk 2010. Published by Oxford University Press.
Except where otherwise noted, this item's license is described as Copyright Robasky, Kimberly, Martha L. Bulyk 2010. Published by Oxford University Press.